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:: J. Biol. Chem. Table of Contents for 1 June 2012; Vol. 287, No. 23 ::
Journal of Biological Chemistry Table of Contents AlertA new issue of
Journal of Biological Chemistry is available online:1 June 2012; Vol. 287,
No. 23

The below Table of Contents is available online

Papers of the Week

 Understanding the Role of Topoisomerase IIIα: Essential Functions of
C Terminus of Drosophila Topoisomerase IIIα in Double Holliday
Junction Dissolution
J. Biol. Chem. 2012 287: 19354.First Published ; doi:10.1074/jbc.P112.363044
[Full Text][PDF]

 Characterization of TMEM106B, a Risk Factor Implicated in Frontotemporal
Lobar Degeneration: Membrane Orientation and Subcellular Localization of
Transmembrane Protein 106B (TMEM106B), a Major Risk Factor for
Frontotemporal Lobar Degeneration
J. Biol. Chem. 2012 287: 19366.First Published ; doi:10.1074/jbc.P112.365098
[Full Text][PDF]


 Novel Role of ADAMTS-5 Protein in Proteoglycan Turnover and Lipoprotein
Retention in AtherosclerosisAthanasios Didangelos, Ursula Mayr, Claudia
Monaco, and Manuel Mayr
J. Biol. Chem. 2012 287: 19341-19345.First Published on April 9, 2012;
doi:10.1074/jbc.C112.350785 [Abstract][Full Text][PDF][Supplemental Data]

Cell Biology

 Orphan Nuclear Receptor Chicken Ovalbumin Upstream Promoter-Transcription
Factor II (COUP-TFII) Protein Negatively Regulates Bone Morphogenetic
Protein 2-induced Osteoblast Differentiation through Suppressing Runt-
related Gene 2 (Runx2) ActivityKkot-Nim Lee, Won-Gu Jang, Eun-Jung Kim, Sin-
Hye Oh, Hye-Ju Son, Sun-Hun Kim, Renny Franceschi, Xiao-Kun Zhang, Shee-Eun
Lee, and Jeong-Tae Koh
J. Biol. Chem. 2012 287: 18888-18899.First Published on April 6, 2012;
doi:10.1074/jbc.M111.311878 [Abstract][Full Text][PDF]

 Integrity of Helix 2-Helix 3 Domain of the PrP Protein Is Not Mandatory for
Prion ReplicationKhalid Salamat, Mohammed Moudjou, Jérôme
Chapuis, Laetitia Herzog, Emilie Jaumain, Vincent Béringue, Human
Rezaei, Annalisa Pastore, Hubert Laude, and Michel Dron
J. Biol. Chem. 2012 287: 18953-18964.First Published on April 16, 2012;
doi:10.1074/jbc.M112.341677 [Abstract][Full Text][PDF][Supplemental Data]

 Vacuolar H+-ATPase (V-ATPase) Promotes Vacuolar Membrane Permeabilization
and Nonapoptotic Death in Stressed YeastHyemin Kim, Adam Kim, and Kyle W.
J. Biol. Chem. 2012 287: 19029-19039.First Published on April 16, 2012;
doi:10.1074/jbc.M112.363390 [Abstract][Full Text][PDF][Supplemental Data]

 Microtubule-associated Protein 1 Light Chain 3 (LC3) Interacts with Bnip3
Protein to Selectively Remove Endoplasmic Reticulum and Mitochondria via
AutophagyRita A. Hanna, Melissa N. Quinsay, Amabel M. Orogo, Kayla Giang,
Shivaji Rikka, and Åsa B. Gustafsson
J. Biol. Chem. 2012 287: 19094-19104.First Published on April 13, 2012;
doi:10.1074/jbc.M111.322933 [Abstract][Full Text][PDF][Supplemental Data]

 MicroRNAs Are Essential for Stretch-induced Vascular Smooth Muscle
Contractile Differentiation via MicroRNA (miR)-145-dependent Expression of L-
type Calcium ChannelsKarolina M. Turczynska, Mardjaneh Karbalaei Sadegh, Per
Hellstrand, Karl Swärd, and Sebastian Albinsson
J. Biol. Chem. 2012 287: 19199-19206.First Published on April 2, 2012;
doi:10.1074/jbc.M112.341073 [Abstract][Full Text][PDF][Supplemental Data]

 Low-density Lipoprotein Receptor Deficiency Causes Impaired
Osteoclastogenesis and Increased Bone Mass in Mice because of Defect in
Osteoclastic Cell-Cell FusionMari Okayasu, Mai Nakayachi, Chiyomi Hayashida,
Junta Ito, Toshio Kaneda, Masaaki Masuhara, Naoto Suda, Takuya Sato, and
Yoshiyuki Hakeda
J. Biol. Chem. 2012 287: 19229-19241.First Published on April 12, 2012;
doi:10.1074/jbc.M111.323600 [Abstract][Full Text][PDF][Supplemental Data]

 Genetic Screening for Regulators of Prz1, a Transcriptional Factor Acting
Downstream of Calcineurin in Fission YeastAtsushi Koike, Toshiaki Kato,
Reiko Sugiura, Yan Ma, Yuki Tabata, Koji Ohmoto, Susie O. Sio, and Takayoshi
J. Biol. Chem. 2012 287: 19294-19303.First Published on April 11, 2012;
doi:10.1074/jbc.M111.310615 [Abstract][Full Text][PDF][Supplemental Data]

 Nicotinamide-induced Mitophagy: EVENT MEDIATED BY HIGH NAD+/NADH RATIO AND
SIRT1 PROTEIN ACTIVATIONSo-young Jang, Hyun Tae Kang, and Eun Seong Hwang
J. Biol. Chem. 2012 287: 19304-19314.First Published on April 9, 2012;
doi:10.1074/jbc.M112.363747 [Abstract][Full Text][PDF][Supplemental Data]

 High Motility of Triple-negative Breast Cancer Cells Is Due to Repression
of Plakoglobin Gene by Metastasis Modulator Protein SLUGCharvann K. Bailey,
Mukul K. Mittal, Smita Misra, and Gautam Chaudhuri
J. Biol. Chem. 2012 287: 19472-19486.First Published on April 11, 2012;
doi:10.1074/jbc.M112.345728 [Abstract][Full Text][PDF][Supplemental Data]

 Sorting of the Yeast Vacuolar-type, Proton-translocating ATPase Enzyme
Cronan, Hae J. Park, Sankaranarayanan Srinivasan, Florante A. Quiocho, and
Tom H. Stevens
J. Biol. Chem. 2012 287: 19487-19500.First Published on April 11, 2012;
doi:10.1074/jbc.M112.343814 [Abstract][Full Text][PDF][Supplemental Data]

 PTTG1 Oncogene Promotes Tumor Malignancy via Epithelial to Mesenchymal
Transition and Expansion of Cancer Stem Cell PopulationChang-Hwan Yoon, Min-
Jung Kim, Hyejin Lee, Rae-Kwon Kim, Eun-Jung Lim, Ki-Chun Yoo, Ga-Haeng Lee,
Yan-Hong Cui, Yeong Seok Oh, Myung Chan Gye, Young Yiul Lee, In-Chul Park,
Sungkwan An, Sang-Gu Hwang, Myung-Jin Park, Yongjoon Suh, and Su-Jae Lee
J. Biol. Chem. 2012 287: 19516-19527.First Published on April 16, 2012;
doi:10.1074/jbc.M111.337428 [Abstract][Full Text][PDF][Supplemental Data]

 BLOC-2, AP-3, and AP-1 Proteins Function in Concert with Rab38 and Rab32
Proteins to Mediate Protein Trafficking to Lysosome-related OrganellesJarred
J. Bultema, Andrea L. Ambrosio, Carolyn L. Burek, and Santiago M. Di Pietro
J. Biol. Chem. 2012 287: 19550-19563.First Published on April 16, 2012;
doi:10.1074/jbc.M112.351908 [Abstract][Full Text][PDF][Supplemental Data]

 Signal-dependent Slow Leukocyte Rolling Does Not Require Cytoskeletal
Anchorage of P-selectin Glycoprotein Ligand-1 (PSGL-1) or Integrin
αLβ2Bojing Shao, Tadayuki Yago, Phillip A. Coghill, Arkadiusz G.
Klopocki, Padmaja Mehta-D'souza, David W. Schmidtke, William Rodgers, and
Rodger P. McEver
J. Biol. Chem. 2012 287: 19585-19598.First Published on April 16, 2012;
doi:10.1074/jbc.M112.361519 [Abstract][Full Text][PDF][Supplemental Data]

 A Stretch of Polybasic Residues Mediates Cdc42 GTPase-activating Protein
(CdGAP) Binding to Phosphatidylinositol 3,4,5-Trisphosphate and Regulates
Its GAP ActivityFereshteh Karimzadeh, Martin Primeau, Driss Mountassif,
Isabelle Rouiller, and Nathalie Lamarche-Vane
J. Biol. Chem. 2012 287: 19610-19621.First Published on April 19, 2012;
doi:10.1074/jbc.M112.344606 [Abstract][Full Text][PDF][Supplemental Data]

 Vav1 Oncogenic Mutation Inhibits T Cell Receptor-induced Calcium
Mobilization through Inhibition of Phospholipase C1 ActivationMira
Knyazhitsky, Etay Moas, Ekaterina Shaginov, Anna Luria, and Alex Braiman
J. Biol. Chem. 2012 287: 19725-19735.First Published on April 3, 2012;
doi:10.1074/jbc.M111.309799 [Abstract][Full Text][PDF]

Developmental Biology

 DiGeorge Syndrome Critical Region 8 (DGCR8) Protein-mediated microRNA
Biogenesis Is Essential for Vascular Smooth Muscle Cell Development in
MiceZixuan Chen, Jianmin Wu, Chuanhe Yang, Pei Fan, Louisa Balazs, Yan Jiao,
Meifeng Lu, Weikuan Gu, Chengyao Li, Lawrence M. Pfeffer, Gabor Tigyi, and
Junming Yue
J. Biol. Chem. 2012 287: 19018-19028.First Published on April 17, 2012;
doi:10.1074/jbc.M112.351791 [Abstract][Full Text][PDF][Supplemental Data]

 Cyclic AMP Signaling Inhibits Megakaryocytic Differentiation by Targeting
Transcription Factor 3 (E2A) Cyclin-dependent Kinase Inhibitor 1A (CDKN1A)
Transcriptional AxisJeremy D. Rubinstein, Kamaleldin E. Elagib, and Adam N.
J. Biol. Chem. 2012 287: 19207-19215.First Published on April 17, 2012;
doi:10.1074/jbc.M112.366476 [Abstract][Full Text][PDF][Supplemental Data]

DNA and Chromosomes

 Assembly and Dynamics of Gp59-Gp32-Single-stranded DNA (ssDNA), a DNA
Helicase Loading Complex Required for Recombination-dependent Replication in
Bacteriophage T4Amy M. Branagan, Robyn L. Maher, and Scott W. Morrical
J. Biol. Chem. 2012 287: 19070-19081.First Published on April 12, 2012;
doi:10.1074/jbc.M112.343830 [Abstract][Full Text][PDF]

 A Conserved Function for the H2A.Z C TerminusDaniel Wratting, Angela
Thistlethwaite, Michael Harris, Leo A. H. Zeef, and Catherine B. Millar
J. Biol. Chem. 2012 287: 19148-19157.First Published on April 9, 2012;
doi:10.1074/jbc.M111.317990 [Abstract][Full Text][PDF][Supplemental Data]

 DNA Repair and Replication Fork Helicases Are Differentially Affected by
Alkyl Phosphotriester LesionAvvaru N. Suhasini, Joshua A. Sommers, Stephen
Yu, Yuliang Wu, Ting Xu, Zvi Kelman, Daniel L. Kaplan, and Robert M. Brosh,
J. Biol. Chem. 2012 287: 19188-19198.First Published on April 12, 2012;
doi:10.1074/jbc.M112.352757 [Abstract][Full Text][PDF]

 Essential Functions of C Terminus of Drosophila Topoisomerase IIIα in
Double Holliday Junction DissolutionStefanie Hartman Chen, Chung-Hsuan Wu,
Jody L. Plank, and Tao-shih Hsieh
J. Biol. Chem. 2012 287: 19346-19353.First Published on April 16, 2012;
doi:10.1074/jbc.M112.363044 [Abstract][Full Text][PDF][Supplemental Data]


 Role of Conserved Glycine in Zinc-dependent Medium Chain
Dehydrogenase/Reductase SuperfamilyManish Kumar Tiwari, Raushan Kumar Singh,
Ranjitha Singh, Marimuthu Jeya, Huimin Zhao, and Jung-Kul Lee
J. Biol. Chem. 2012 287: 19429-19439.First Published on April 12, 2012;
doi:10.1074/jbc.M111.335752 [Abstract][Full Text][PDF][Supplemental Data]

 Unusual Spectroscopic and Ligand Binding Properties of the Cytochrome P450-
Flavodoxin Fusion Enzyme XplASoi H. Bui, Kirsty J. McLean, Myles R.
Cheesman, Justin M. Bradley, Stephen E. J. Rigby, Colin W. Levy, David Leys,
and Andrew W. Munro
J. Biol. Chem. 2012 287: 19699-19714.First Published on April 12, 2012;
doi:10.1074/jbc.M111.319202 [Abstract][Full Text][PDF][Supplemental Data]

Gene Regulation

 Identification of Function for CD44 Intracytoplasmic Domain (CD44-ICD):
PROMOTER RESPONSE ELEMENTKarl E. Miletti-González, Kyle Murphy, Muthu
N. Kumaran, Abhilash K. Ravindranath, Roman P. Wernyj, Swayamjot Kaur,
Gregory D. Miles, Elaine Lim, Rigel Chan, Marina Chekmareva, Debra S.
Heller, David Foran, Wenjin Chen, Michael Reiss, Elisa V. Bandera, Kathleen
Scotto, and Lorna Rodríguez-Rodríguez
J. Biol. Chem. 2012 287: 18995-19007.First Published on March 20, 2012;
doi:10.1074/jbc.M111.318774 [Abstract][Full Text][PDF][Supplemental Data]

 Histone H2B Ubiquitylation Promotes Activity of the Intact Set1 Histone
Methyltransferase Complex in Fission YeastAriane Racine, Viviane
Pagé, Stephen Nagy, David Grabowski, and Jason C. Tanny
J. Biol. Chem. 2012 287: 19040-19047.First Published on April 13, 2012;
doi:10.1074/jbc.M112.356253 [Abstract][Full Text][PDF][Supplemental Data]

 Nucleophosmin (NPM1/B23) Interacts with Activating Transcription Factor 5
(ATF5) Protein and Promotes Proteasome- and Caspase-dependent ATF5
Degradation in Hepatocellular Carcinoma CellsXijun Liu, Dan Liu, Dongmeng
Qian, Jenny Dai, Yi An, Shaoyan Jiang, Bruce Stanley, Jinming Yang, Bin
Wang, Xinyuan Liu, and David X. Liu
J. Biol. Chem. 2012 287: 19599-19609.First Published on April 23, 2012;
doi:10.1074/jbc.M112.363622 [Abstract][Full Text][PDF][Supplemental Data]

 Estrogen-induced Expression of Fos-related Antigen 1 (FRA-1) Regulates
Uterine Stromal Differentiation and RemodelingAmrita Das, Quanxi Li, Mary J.
Laws, Hatice Kaya, Milan K. Bagchi, and Indrani C. Bagchi
J. Biol. Chem. 2012 287: 19622-19630.First Published on April 18, 2012;
doi:10.1074/jbc.M111.297663 [Abstract][Full Text][PDF]

Genomics and Proteomics

 Molecular Cloning and Characterization of First Organic Matrix Protein from
Sclerites of Red Coral, Corallium rubrumJulien Debreuil, Éric
Tambutté, Didier Zoccola, Emeline Deleury, Jean-Marie Guigonis,
Michel Samson, Denis Allemand, and Sylvie Tambutté
J. Biol. Chem. 2012 287: 19367-19376.First Published on April 13, 2012;
doi:10.1074/jbc.M112.352005 [Abstract][Full Text][PDF][Supplemental Data]

Glycobiology and Extracellular Matrices

 Quantitative Proteomic Analysis of Eight Cartilaginous Tissues Reveals
Characteristic Differences as well as Similarities between SubgroupsPatrik
Önnerfjord, Areej Khabut, Finn P. Reinholt, Olle Svensson, and Dick
J. Biol. Chem. 2012 287: 18913-18924.First Published on April 9, 2012;
doi:10.1074/jbc.M111.298968 [Abstract][Full Text][PDF][Supplemental Data]

 Receptor for Advanced Glycation End Products (RAGE) Functions as Receptor
for Specific Sulfated Glycosaminoglycans, and Anti-RAGE Antibody or Sulfated
Glycosaminoglycans Delivered in Vivo Inhibit Pulmonary Metastasis of Tumor
CellsShuji Mizumoto, Jun Takahashi, and Kazuyuki Sugahara
J. Biol. Chem. 2012 287: 18985-18994.First Published on April 9, 2012;
doi:10.1074/jbc.M111.313437 [Abstract][Full Text][PDF][Supplemental Data]

 Melanocortin 1 Receptor Regulates Melanoma Cell Migration by Controlling
Syndecan-2 ExpressionHeesung Chung, Jung-hyun Lee, Dayun Jeong, Inn-Oc Han,
and Eok-Soo Oh
J. Biol. Chem. 2012 287: 19326-19335.First Published on April 6, 2012;
doi:10.1074/jbc.M111.334730 [Abstract][Full Text][PDF]

 Unraveling Unique Structure and Biosynthesis Pathway of N-Linked Glycans in
Human Fungal Pathogen Cryptococcus neoformans by Glycomics AnalysisJeong-Nam
Park, Dong-Jik Lee, Ohsuk Kwon, Doo-Byoung Oh, Yong-Sun Bahn, and Hyun Ah
J. Biol. Chem. 2012 287: 19501-19515.First Published on April 12, 2012;
doi:10.1074/jbc.M112.354209 [Abstract][Full Text][PDF][Supplemental Data]

 Overexpression of Hyaluronan-binding Protein 1 (HABP1/p32/gC1qR) in HepG2
Cells Leads to Increased Hyaluronan Synthesis and Cell Proliferation by Up-
regulation of Cyclin D1 in AKT-dependent PathwayRachna Kaul, Paramita Saha,
Mallampati Saradhi, Ramachandra L. A. Prasad, Soumya Chatterjee, Ilora
Ghosh, Rakesh K. Tyagi, and Kasturi Datta
J. Biol. Chem. 2012 287: 19750-19764.First Published on March 26, 2012;
doi:10.1074/jbc.M111.266270 [Abstract][Full Text][PDF]


 Essential Role for IKKβ in Production of Type 1 Interferons by
Plasmacytoid Dendritic CellsEduardo Pauls, Natalia Shpiro, Mark Peggie,
Erick R. Young, Ronald J. Sorcek, Li Tan, Hwan Geun Choi, and Philip Cohen
J. Biol. Chem. 2012 287: 19216-19228.First Published on April 16, 2012;
doi:10.1074/jbc.M112.345405 [Abstract][Full Text][PDF][Supplemental Data]

 Ectopic Expression of Human MutS Homologue 2 on Renal Carcinoma Cells Is
Induced by Oxidative Stress with Interleukin-18 Promotion via p38 Mitogen-
activated Protein Kinase (MAPK) and c-Jun N-terminal Kinase (JNK) Signaling
PathwaysChen Mo, Yumei Dai, Ning Kang, Lianxian Cui, and Wei He
J. Biol. Chem. 2012 287: 19242-19254.First Published on April 9, 2012;
doi:10.1074/jbc.M112.349936 [Abstract][Full Text][PDF][Supplemental Data]

 Surfactant Protein D (Sp-D) Binds to Membrane-proximal Domain (D3) of
Signal Regulatory Protein α (SIRPα), a Site Distant from Binding
Domain of CD47, while Also Binding to Analogous Region on Signal Regulatory
Protein β (SIRPβ)Bénédicte Fournier, Rakieb
Andargachew, Alexander Z. Robin, Oskar Laur, Dennis R. Voelker, Winston Y.
Lee, Dominique Weber, and Charles A. Parkos
J. Biol. Chem. 2012 287: 19386-19398.First Published on April 16, 2012;
doi:10.1074/jbc.M111.324533 [Abstract][Full Text][PDF][Supplemental Data]

 Neutrophils Express Distinct RNA Receptors in a Non-canonical WayMichael
Berger, Chin-Yuan Hsieh, Martina Bakele, Veronica Marcos, Nikolaus Rieber,
Michael Kormann, Lauren Mays, Laura Hofer, Olaf Neth, Ljubomir Vitkov, Wolf
Dietrich Krautgartner, Dietrich von Schweinitz, Roland Kappler, Andreas
Hector, Alexander Weber, and Dominik Hartl
J. Biol. Chem. 2012 287: 19409-19417.First Published on April 24, 2012;
doi:10.1074/jbc.M112.353557 [Abstract][Full Text][PDF]

 Factor H-related Protein 4 Activates Complement by Serving as a Platform
for the Assembly of Alternative Pathway C3 Convertase via Its Interaction
with C3b ProteinMario Hebecker and Mihály Józsi
J. Biol. Chem. 2012 287: 19528-19536.First Published on April 19, 2012;
doi:10.1074/jbc.M112.364471 [Abstract][Full Text][PDF][Supplemental Data]

 S-Palmitoylation and Ubiquitination Differentially Regulate Interferon-
induced Transmembrane Protein 3 (IFITM3)-mediated Resistance to Influenza
VirusJacob S. Yount, Roos A. Karssemeijer, and Howard C. Hang
J. Biol. Chem. 2012 287: 19631-19641.First Published on April 17, 2012;
doi:10.1074/jbc.M112.362095 [Abstract][Full Text][PDF][Supplemental Data]

Membrane Biology

 Palmitoylation of MPP1 (Membrane-palmitoylated Protein 1)/p55 Is Crucial
for Lateral Membrane Organization in Erythroid CellsAgnieszka Lach, Michal
Grzybek, Elzbieta Heger, Justyna Korycka, Marcin Wolny, Jakub Kubiak, Adam
Kolondra, Dzamila M. Boguslawska, Katarzyna Augoff, Michal Majkowski, Joanna
Podkalicka, Jakub Kaczor, Adam Stefanko, Kazimierz Kuliczkowski, and
Aleksander F. Sikorski
J. Biol. Chem. 2012 287: 18974-18984.First Published on April 10, 2012;
doi:10.1074/jbc.M111.332981 [Abstract][Full Text][PDF][Supplemental Data]

 Protein Kinase C (PKC)-promoted Endocytosis of Glutamate Transporter GLT-1
Requires Ubiquitin Ligase Nedd4-2-dependent Ubiquitination but Not
PhosphorylationNoemí García-Tardón, Inmaculada M.
González-González, Jaime Martínez-Villarreal, Enrique
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